Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
OSCT_3173Protein of unknown function DUF404. (489 aa)    
Predicted Functional Partners:
OSCT_3174
Hypothetical protein.
    0.998
OSCT_3175
Transglutaminase domain-containing protein.
 
    0.937
OSCT_0551
Glutamate synthase (ferredoxin).
     
  0.845
pepA
Leucyl aminopeptidase; Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N- terminal amino acids from various peptides.
    
  0.505
OSCT_3171
Helix-turn-helix domain protein.
 
     0.473
OSCT_0799
Gamma-glutamyltransferase.
    
  0.460
OSCT_0145
Glu/Leu/Phe/Val dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
   
 
  0.441
OSCT_1140
aromatic-L-amino-acid decarboxylase.
    
  0.435
OSCT_0525
Aminotransferase class I and II.
    
  0.421
OSCT_3029
Peptidase M1 membrane alanine aminopeptidase.
    
  0.418
Your Current Organism:
Oscillochloris trichoides
NCBI taxonomy Id: 765420
Other names: O. trichoides DG-6, Oscillochloris trichoides DG-6, Oscillochloris trichoides str. DG-6, Oscillochloris trichoides strain DG-6
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