STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OSCT_3188Mannose-6-phosphate isomerase. (358 aa)    
Predicted Functional Partners:
OSCT_3127
Phosphomannomutase.
 
 
 0.956
OSCT_2457
Beta-galactosidase.
 
 
 0.934
pgi
Glucose-6-phosphate isomerase; Belongs to the GPI family.
  
 
 0.926
OSCT_1644
Phosphomannomutase.
 
 
 0.919
OSCT_2331
Transcriptional regulator protein.
 
 
 0.918
OSCT_1631
Nucleotidyl transferase.
  
 0.904
OSCT_0033
Nucleotidyl transferase.
  
 0.870
OSCT_0947
Nucleotidyl transferase.
  
 0.870
glmS
Glucosamine/fructose-6-phosphate aminotransferase, isomerizing; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source.
    
 0.861
OSCT_0444
ROK family protein.
 
 
 0.846
Your Current Organism:
Oscillochloris trichoides
NCBI taxonomy Id: 765420
Other names: O. trichoides DG-6, Oscillochloris trichoides DG-6, Oscillochloris trichoides str. DG-6, Oscillochloris trichoides strain DG-6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.