STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OSCT_3201Dual specificity protein phosphatase. (172 aa)    
Predicted Functional Partners:
OSCT_2791
Hypothetical protein.
  
 
 
 0.820
OSCT_3202
Hypothetical protein.
       0.773
OSCT_2395
Hypothetical protein.
   
 0.685
OSCT_1193
Hypothetical protein.
    
 0.643
OSCT_2511
Hypothetical protein.
    
 0.643
OSCT_3200
GCN5-related N-acetyltransferase.
       0.562
OSCT_3199
Hypothetical protein.
       0.547
OSCT_1113
Hypothetical protein.
  
  
  0.541
OSCT_2134
Band 7 protein.
  
 
   0.535
OSCT_1139
WD-40 repeat-containing protein.
  
 0.520
Your Current Organism:
Oscillochloris trichoides
NCBI taxonomy Id: 765420
Other names: O. trichoides DG-6, Oscillochloris trichoides DG-6, Oscillochloris trichoides str. DG-6, Oscillochloris trichoides strain DG-6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.