STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OSCT_3217Redox-active disulfide protein 2. (57 aa)    
Predicted Functional Partners:
OSCT_0392
Immunoglobulin I-set domain protein.
    
 
 0.838
OSCT_3216
Permease.
 
  
 0.836
OSCT_1141
Dihydrolipoamide dehydrogenase.
  
 0.786
msrA
Peptide methionine sulfoxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.
   
 0.767
OSCT_1909
NADH dehydrogenase (quinone).
  
 
 0.747
OSCT_0556
Signal transduction histidine kinase regulating C4-dicarboxylate transport system.
  
 0.666
OSCT_2791
Hypothetical protein.
  
 0.665
OSCT_3215
Arsenical-resistance protein.
     
 0.628
OSCT_3218
Transcriptional regulator, ArsR family.
     
 0.624
OSCT_0213
Thioredoxin reductase.
  
 0.618
Your Current Organism:
Oscillochloris trichoides
NCBI taxonomy Id: 765420
Other names: O. trichoides DG-6, Oscillochloris trichoides DG-6, Oscillochloris trichoides str. DG-6, Oscillochloris trichoides strain DG-6
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