STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OSCT_3224Polysaccharide deacetylase. (293 aa)    
Predicted Functional Partners:
OSCT_2899
Glycosyl transferase family 2.
  
 
 0.595
OSCT_1616
Glycosyl hydrolase 53 protein.
    
 0.514
OSCT_2371
Hypothetical protein.
 
 
  0.472
OSCT_3225
FolC bifunctional protein; Belongs to the folylpolyglutamate synthase family.
  
    0.451
OSCT_0851
Hypothetical protein.
  
  
 0.430
OSCT_1254
Glycosyltransferase 36.
     
 0.413
OSCT_0026
Glycosyl transferase family 2.
 
  
 0.408
OSCT_0435
Hypothetical protein.
  
 
  0.403
OSCT_0867
Hypothetical protein.
  
 
  0.403
OSCT_0871
Hypothetical protein.
  
 
  0.403
Your Current Organism:
Oscillochloris trichoides
NCBI taxonomy Id: 765420
Other names: O. trichoides DG-6, Oscillochloris trichoides DG-6, Oscillochloris trichoides str. DG-6, Oscillochloris trichoides strain DG-6
Server load: medium (64%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.