STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0C3G7V6AA_TRNA_LIGASE_II domain-containing protein. (728 aa)    
Predicted Functional Partners:
A0A0C3CD99
Ribosomal_L18e/L15P domain-containing protein.
   
 
 0.954
A0A0C3CGJ8
Uncharacterized protein; Belongs to the universal ribosomal protein uS15 family.
  
 
 0.950
A0A0C3GA90
Tr-type G domain-containing protein.
  
 0.949
A0A0C3BWV1
Uncharacterized protein.
   
 
 0.945
A0A0C3BLC8
Uncharacterized protein; Belongs to the universal ribosomal protein uL3 family.
   
 
 0.941
A0A0C3BQI3
Ribosomal protein; Belongs to the universal ribosomal protein uL1 family.
   
 
 0.933
A0A0C3GJH0
Uncharacterized protein; Belongs to the universal ribosomal protein uL22 family.
   
 
 0.922
A0A0C3FMG2
Uncharacterized protein.
  
   0.921
A0A0C3BMQ4
Tyrosine--tRNA ligase.
  
 
 0.920
A0A0C3G6M4
Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.
  
 
 0.894
Your Current Organism:
Piloderma croceum
NCBI taxonomy Id: 765440
Other names: P. croceum F 1598, Piloderma croceum F 1598
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