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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADV09972.1KEGG: mlo:mlr4587 hypothetical protein; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein. (266 aa)    
Predicted Functional Partners:
ADV09973.1
PFAM: SMP-30/Gluconolaconase/LRE-like region-containing protein; KEGG: mlo:mll4586 periplasmic ATP/GTP-binding protein.
 
     0.862
ADV11990.1
KEGG: mlo:mll6773 hypothetical protein.
  
     0.649
ADV09889.1
KEGG: mlo:mlr4759 hypothetical protein.
  
     0.639
ADV10068.1
KEGG: mlo:mll4444 hypothetical protein.
  
   
 0.632
ADV09391.1
KEGG: sfu:Sfum_0087 hypothetical protein.
  
     0.629
ADV14698.1
PFAM: peptidase C48 SUMO/Sentrin/Ubl1; KEGG: mlo:mlr6316 hypothetical protein.
  
     0.629
ADV10632.1
PFAM: protein of unknown function DUF930; KEGG: mlo:mll3623 hypothetical protein.
 
     0.627
ADV13726.1
PFAM: major facilitator superfamily MFS_1; KEGG: mlo:mlr8206 MFS family transporter.
  
    0.542
ADV12775.1
KEGG: mlo:mlr0332 hypothetical protein.
  
     0.541
ADV13531.1
KEGG: mlo:mll8471 hypothetical protein.
  
     0.541
Your Current Organism:
Mesorhizobium ciceri biovar
NCBI taxonomy Id: 765698
Other names: M. ciceri biovar biserrulae WSM1271, Mesorhizobium ciceri biovar biserrulae WSM1271, Mesorhizobium ciceri biovar biserrulae str. WSM1271, Mesorhizobium ciceri biovar biserrulae strain WSM1271, Mesorhizobium ciceri bv. biserrulae WSM1271
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