STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADV10818.1PFAM: Xylose isomerase domain-containing protein TIM barrel; KEGG: mlo:mlr3364 D-tagatose 3-epimerase. (295 aa)    
Predicted Functional Partners:
ADV10817.1
PFAM: Mandelate racemase/muconate lactonizing protein; KEGG: mlo:mlr3365 hypothetical protein.
 
     0.688
ADV10815.1
PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; KEGG: mlo:mlr3367 phosphoglycerate dehydrogenase.
 
     0.653
ADV10816.1
GntR domain protein; KEGG: mlo:mlr3366 GntR family transcriptional regulator; PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH.
 
     0.652
xylB
Xylulokinase; KEGG: mlo:mlr5033 xylulokinase; TIGRFAM: xylulokinase; PFAM: Carbohydrate kinase, FGGY-like.
  
 
 0.517
ADV10814.1
KEGG: mlo:mlr3368 hypothetical protein.
       0.502
ADV09675.1
PFAM: Protein of unknown function DUF2090; PfkB domain protein; KEGG: mlo:mll4982 myo-inositol catabolism IolC.
  
  
 0.408
Your Current Organism:
Mesorhizobium ciceri biovar
NCBI taxonomy Id: 765698
Other names: M. ciceri biovar biserrulae WSM1271, Mesorhizobium ciceri biovar biserrulae WSM1271, Mesorhizobium ciceri biovar biserrulae str. WSM1271, Mesorhizobium ciceri biovar biserrulae strain WSM1271, Mesorhizobium ciceri bv. biserrulae WSM1271
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