Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
ADV11153.1KEGG: mlo:mll2846 hypothetical protein. (221 aa)    
Predicted Functional Partners:
ADV11152.1
PFAM: Invasion associated locus B family protein; KEGG: mlo:mll2847 hypothetical protein.
       0.789
ADV11151.1
PFAM: YadA domain-containing protein; Haemagluttinin domain protein; Hep_Hag repeat-containing protein; KEGG: ara:Arad_8991 rhizobiocin/RTX toxin and hemolysin-type calcium binding protein.
       0.763
ADV11154.1
KEGG: mlo:mll2845 hypothetical protein.
       0.710
ADV11155.1
KEGG: mlo:mll2844 invasion-like protein; manually curated; PFAM: Invasion associated locus B family protein.
       0.646
ADV11149.1
KEGG: mlo:mll2850 hypothetical protein.
       0.430
ADV11150.1
Manually curated; PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: mlo:mll2849 transcriptional regulator; SMART: Helix-turn-helix, AraC domain.
       0.430
Your Current Organism:
Mesorhizobium ciceri biovar
NCBI taxonomy Id: 765698
Other names: M. ciceri biovar biserrulae WSM1271, Mesorhizobium ciceri biovar biserrulae WSM1271, Mesorhizobium ciceri biovar biserrulae str. WSM1271, Mesorhizobium ciceri biovar biserrulae strain WSM1271, Mesorhizobium ciceri bv. biserrulae WSM1271
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