Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
ADV11156.1KEGG: sjp:SJA_C1-22310 putative agglutination protein; TIGRFAM: type I secretion outer membrane protein, TolC family; PFAM: outer membrane efflux protein. (482 aa)    
Predicted Functional Partners:
ADV11158.1
KEGG: sjp:SJA_C1-22280 HlyD-family secretion protein; TIGRFAM: type I secretion membrane fusion protein, HlyD family; PFAM: secretion protein HlyD family protein.
 
 
 0.936
ADV11157.1
TIGRFAM: type I secretion system ATPase; PFAM: ABC transporter related; ABC transporter transmembrane region; KEGG: sjp:SJA_C1-22300 putative type I secretion protein ATP-binding protein; SMART: AAA ATPase.
 
   
 0.932
ADV11160.1
Hypothetical protein; KEGG: dba:Dbac_0003 transglutaminase family protein cysteine peptidase BTLCP.
 
   
 0.796
ADV11187.1
KEGG: ret:RHE_CH00334 HlyD family protein secretion protein; TIGRFAM: type I secretion membrane fusion protein, HlyD family; PFAM: secretion protein HlyD family protein.
 
 
 0.786
ADV14520.1
KEGG: avn:Avin_16250 type I secretion membrane fusion protein; TIGRFAM: type I secretion membrane fusion protein, HlyD family; PFAM: secretion protein HlyD family protein.
 
 
 0.770
ADV14451.1
KEGG: mlo:mlr6772 rhiziobicin secretion ABC transporter, RspE; TIGRFAM: type I secretion membrane fusion protein, HlyD family; PFAM: secretion protein HlyD family protein.
 
 
 0.738
ADV11161.1
TIGRFAM: outer membrane adhesin like proteiin; type 1 secretion C-terminal target domain; KEGG: pol:Bpro_0304 hypothetical protein.
 
  
 0.736
ADV09220.1
KEGG: mlo:mll5520 RND efflux membrane fusion protein; TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
 0.708
ADV09221.1
KEGG: mlo:mll5519 RND efflux membrane fusion protein; TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
 0.708
ADV10499.1
KEGG: mlo:mll3833 periplasmic linker protein; TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
 0.708
Your Current Organism:
Mesorhizobium ciceri biovar
NCBI taxonomy Id: 765698
Other names: M. ciceri biovar biserrulae WSM1271, Mesorhizobium ciceri biovar biserrulae WSM1271, Mesorhizobium ciceri biovar biserrulae str. WSM1271, Mesorhizobium ciceri biovar biserrulae strain WSM1271, Mesorhizobium ciceri bv. biserrulae WSM1271
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