close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADV11157.1TIGRFAM: type I secretion system ATPase; PFAM: ABC transporter related; ABC transporter transmembrane region; KEGG: sjp:SJA_C1-22300 putative type I secretion protein ATP-binding protein; SMART: AAA ATPase. (710 aa)    
Predicted Functional Partners:
ADV11156.1
KEGG: sjp:SJA_C1-22310 putative agglutination protein; TIGRFAM: type I secretion outer membrane protein, TolC family; PFAM: outer membrane efflux protein.
 
   
 0.925
ADV11158.1
KEGG: sjp:SJA_C1-22280 HlyD-family secretion protein; TIGRFAM: type I secretion membrane fusion protein, HlyD family; PFAM: secretion protein HlyD family protein.
   
 0.925
ADV11160.1
Hypothetical protein; KEGG: dba:Dbac_0003 transglutaminase family protein cysteine peptidase BTLCP.
  
     0.758
ADV11187.1
KEGG: ret:RHE_CH00334 HlyD family protein secretion protein; TIGRFAM: type I secretion membrane fusion protein, HlyD family; PFAM: secretion protein HlyD family protein.
  
 0.725
ADV14520.1
KEGG: avn:Avin_16250 type I secretion membrane fusion protein; TIGRFAM: type I secretion membrane fusion protein, HlyD family; PFAM: secretion protein HlyD family protein.
  
 0.710
ADV11159.1
KEGG: mlo:mll6467 hypothetical protein.
       0.655
ADV11161.1
TIGRFAM: outer membrane adhesin like proteiin; type 1 secretion C-terminal target domain; KEGG: pol:Bpro_0304 hypothetical protein.
  
   
 0.646
ADV14451.1
KEGG: mlo:mlr6772 rhiziobicin secretion ABC transporter, RspE; TIGRFAM: type I secretion membrane fusion protein, HlyD family; PFAM: secretion protein HlyD family protein.
  
 0.624
ADV14822.1
PFAM: aminoglycoside 3-N-acetyltransferase; AMP-dependent synthetase and ligase; KEGG: mlo:mlr6282 phosphinothricin tripeptide synthetase B.
  
  
 0.588
ADV11991.1
KEGG: mlo:mlr1948 ATP-binding protein of ABC transporter; PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase.
 
0.443
Your Current Organism:
Mesorhizobium ciceri biovar
NCBI taxonomy Id: 765698
Other names: M. ciceri biovar biserrulae WSM1271, Mesorhizobium ciceri biovar biserrulae WSM1271, Mesorhizobium ciceri biovar biserrulae str. WSM1271, Mesorhizobium ciceri biovar biserrulae strain WSM1271, Mesorhizobium ciceri bv. biserrulae WSM1271
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.