Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ADV11165.1KEGG: mlo:mlr5633 hypothetical protein. (234 aa)    
Predicted Functional Partners:
ADV09778.1
KEGG: mlo:mlr4851 hypothetical protein.
  
     0.743
ADV11164.1
KEGG: mes:Meso_4012 hypothetical protein.
 
     0.719
ADV13833.1
KEGG: mlo:mlr7894 hypothetical protein.
  
     0.677
ADV11316.1
KEGG: mes:Meso_2154 hypothetical protein.
  
     0.640
ADV10055.1
KEGG: mlo:mll4454 nickel-cobalt-cadmium resistance protein NccN.
  
    0.623
ADV12328.1
KEGG: mlo:mll1482 hypothetical protein.
  
     0.621
ADV12383.1
PFAM: BA14K family protein; KEGG: mlo:mlr1403 hypothetical protein.
  
     0.619
ADV13927.1
Porin; Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane.
  
     0.610
ADV13619.1
KEGG: mlo:mll8359 hypothetical protein.
  
     0.602
ADV10136.1
Heme exporter protein CcmD; Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes; Belongs to the CcmD/CycX/HelD family.
  
     0.598
Your Current Organism:
Mesorhizobium ciceri biovar
NCBI taxonomy Id: 765698
Other names: M. ciceri biovar biserrulae WSM1271, Mesorhizobium ciceri biovar biserrulae WSM1271, Mesorhizobium ciceri biovar biserrulae str. WSM1271, Mesorhizobium ciceri biovar biserrulae strain WSM1271, Mesorhizobium ciceri bv. biserrulae WSM1271
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