STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADV11167.1PFAM: glucose-methanol-choline oxidoreductase; GMC oxidoreductase; KEGG: mlo:mll6785 dehydrogenase. (509 aa)    
Predicted Functional Partners:
pdxH
Pyridoxamine 5'-phosphate oxidase; Catalyzes the oxidation of either pyridoxine 5'-phosphate (PNP) or pyridoxamine 5'-phosphate (PMP) into pyridoxal 5'-phosphate (PLP).
   
 
  0.905
ADV11184.1
PFAM: aminotransferase class V; KEGG: mlo:mlr6806 aspartate aminotransferase.
   
 
  0.903
ADV10295.1
TIGRFAM: pyridoxal kinase; KEGG: mlo:mlr4132 pyridoxamine kinase; PFAM: PfkB domain protein; Belongs to the pyridoxine kinase family.
     
  0.900
ADV11185.1
PFAM: short-chain dehydrogenase/reductase SDR; KEGG: mlo:mlr6807 3-oxoacyl-(acyl-carrier protein) reductase.
     
  0.900
ADV13547.1
PFAM: aldo/keto reductase; KEGG: rle:pRL100446 putative oxidoreductase.
    
  0.900
ADV14573.1
Manually curated; KEGG: spe:Spro_2085 gluconate 2-dehydrogenase (acceptor); PFAM: cytochrome c class I.
  
 
 0.825
ADV11168.1
PFAM: GntR domain protein; regulatory protein GntR HTH; KEGG: bav:BAV1916 transcriptional regulator.
       0.600
ADV14822.1
PFAM: aminoglycoside 3-N-acetyltransferase; AMP-dependent synthetase and ligase; KEGG: mlo:mlr6282 phosphinothricin tripeptide synthetase B.
     
 0.532
ADV11169.1
PFAM: glucose-methanol-choline oxidoreductase; GMC oxidoreductase; KEGG: mlo:mlr6792 dehydrogenase.
 
    
0.492
ADV09528.1
KEGG: mlo:mll5154 hypothetical protein.
    
 0.489
Your Current Organism:
Mesorhizobium ciceri biovar
NCBI taxonomy Id: 765698
Other names: M. ciceri biovar biserrulae WSM1271, Mesorhizobium ciceri biovar biserrulae WSM1271, Mesorhizobium ciceri biovar biserrulae str. WSM1271, Mesorhizobium ciceri biovar biserrulae strain WSM1271, Mesorhizobium ciceri bv. biserrulae WSM1271
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