STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
potA-7Spermidine/putrescine ABC transporter ATPase subunit; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system. (369 aa)    
Predicted Functional Partners:
ADV11784.1
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mlo:mll2949 ABC transporter, permease protein.
  
 0.955
ADV11785.1
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mlo:mll2950 hypothetical protein.
 
 
 0.948
ADV11786.1
PFAM: extracellular solute-binding protein family 1; KEGG: mlo:mll2951 ABC transporter, binding protein component.
 
  
 0.830
ADV12124.1
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mlo:mll1739 permease protein of polyamine ABC transporter.
 
  
 0.764
ADV14211.1
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mlo:mlr7381 ABC transporter, permease protein.
 
  
 0.748
ADV11782.1
PFAM: FAD dependent oxidoreductase; KEGG: mlo:mll2947 hypothetical protein.
 
    0.736
ADV11787.1
KEGG: mlo:mll2952 transcriptional regulator; PFAM: Cupin 2 conserved barrel domain protein; helix-turn-helix domain protein; SMART: helix-turn-helix domain protein.
       0.718
ADV09823.1
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rde:RD1_3862 ABC transporter, permease protein, putative.
  
 0.717
ADV13991.1
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mlo:mlr7677 ABC transporter, permease protein.
 
 
 0.707
ADV12123.1
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mlo:mll1740 permease protein of polyamine ABC transporter.
 
 
 0.705
Your Current Organism:
Mesorhizobium ciceri biovar
NCBI taxonomy Id: 765698
Other names: M. ciceri biovar biserrulae WSM1271, Mesorhizobium ciceri biovar biserrulae WSM1271, Mesorhizobium ciceri biovar biserrulae str. WSM1271, Mesorhizobium ciceri biovar biserrulae strain WSM1271, Mesorhizobium ciceri bv. biserrulae WSM1271
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