STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADV12327.1Dyp-type peroxidase family; KEGG: mlo:mlr1483 hypothetical protein; TIGRFAM: Dyp-type peroxidase family; PFAM: Dyp-type peroxidase. (327 aa)    
Predicted Functional Partners:
ADV10846.1
PFAM: copper resistance protein CopC; KEGG: mlo:mll3323 hypothetical protein.
  
  
 0.850
ADV10844.1
PFAM: protein of unknown function DUF461; KEGG: mlo:mll3326 hypothetical protein.
  
  
 0.735
ADV12328.1
KEGG: mlo:mll1482 hypothetical protein.
       0.533
tatA
Twin-arginine translocation protein, TatA/E family subunit; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system.
  
  
 0.452
tatB
Twin-arginine translocation protein, TatB subunit; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. Together with TatC, TatB is part of a receptor directly interacting with Tat signal peptides. TatB may form an oligomeric binding site that transiently accommodates folded Tat precursor proteins before their translocation.
  
  
 0.452
ADV12330.1
PFAM: Cl- channel voltage-gated family protein; CBS domain containing protein; KEGG: mlo:mll1477 chloride channel protein.
 
   
 0.433
ADV14822.1
PFAM: aminoglycoside 3-N-acetyltransferase; AMP-dependent synthetase and ligase; KEGG: mlo:mlr6282 phosphinothricin tripeptide synthetase B.
  
  
 0.429
Your Current Organism:
Mesorhizobium ciceri biovar
NCBI taxonomy Id: 765698
Other names: M. ciceri biovar biserrulae WSM1271, Mesorhizobium ciceri biovar biserrulae WSM1271, Mesorhizobium ciceri biovar biserrulae str. WSM1271, Mesorhizobium ciceri biovar biserrulae strain WSM1271, Mesorhizobium ciceri bv. biserrulae WSM1271
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