Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ADV12332.1KEGG: mlo:msr1475 hypothetical protein. (65 aa)    
Predicted Functional Partners:
ADV12331.1
KEGG: mlo:msr1476 hypothetical protein.
       0.840
ADV12333.1
KEGG: mlo:mlr1474 hypothetical protein.
       0.814
ADV12334.1
PFAM: regulatory protein TetR; KEGG: mlo:mlr1472 transcriptional regulator.
 
     0.546
ADV09660.1
PFAM: protein of unknown function DUF1402; KEGG: mlo:mll5001 hypothetical protein.
  
     0.534
ADV14001.1
PFAM: Protein of unknown function DUF2336; KEGG: mlo:mll7653 hypothetical protein.
  
     0.477
ADV10290.1
Microcystin LR degradation protein MlrC-like protein; Involved in peptidolytic degradation of cyclic heptapeptide hepatotoxin microcystin (MC); Belongs to the peptidase M81 family.
  
     0.436
Your Current Organism:
Mesorhizobium ciceri biovar
NCBI taxonomy Id: 765698
Other names: M. ciceri biovar biserrulae WSM1271, Mesorhizobium ciceri biovar biserrulae WSM1271, Mesorhizobium ciceri biovar biserrulae str. WSM1271, Mesorhizobium ciceri biovar biserrulae strain WSM1271, Mesorhizobium ciceri bv. biserrulae WSM1271
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