STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADV12333.1KEGG: mlo:mlr1474 hypothetical protein. (178 aa)    
Predicted Functional Partners:
ADV12331.1
KEGG: mlo:msr1476 hypothetical protein.
 
    0.801
ADV10404.1
PFAM: Protein of unknown function DUF2312; KEGG: mlo:mll3968 hypothetical protein; Belongs to the UPF0335 family.
  
   
 0.797
ADV10544.1
PFAM: protein of unknown function DUF1013; KEGG: mlo:mll3765 hypothetical protein.
  
   
 0.784
ADV12332.1
KEGG: mlo:msr1475 hypothetical protein.
       0.762
atpF
H+transporting two-sector ATPase B/B' subunit; Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0); Belongs to the ATPase B chain family.
  
   
 0.759
ADV09182.1
PFAM: protein of unknown function DUF1058; KEGG: mlo:mll5573 hypothetical protein.
  
     0.756
recO
DNA repair protein RecO; Involved in DNA repair and RecF pathway recombination.
  
     0.751
ADV09927.1
PFAM: Glutathione S-transferase domain; KEGG: mlo:mlr4635 glutathione S-transferase.
  
     0.732
ADV09631.1
TIGRFAM: double-strand break repair protein AddB; KEGG: mlo:mll5084 hypothetical protein.
  
     0.726
ADV13847.1
PFAM: DNA polymerase III chi subunit HolC; KEGG: mlo:mlr7869 DNA polymerase III subunit chi.
  
     0.716
Your Current Organism:
Mesorhizobium ciceri biovar
NCBI taxonomy Id: 765698
Other names: M. ciceri biovar biserrulae WSM1271, Mesorhizobium ciceri biovar biserrulae WSM1271, Mesorhizobium ciceri biovar biserrulae str. WSM1271, Mesorhizobium ciceri biovar biserrulae strain WSM1271, Mesorhizobium ciceri bv. biserrulae WSM1271
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.