STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADV14421.1PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: ara:Arad_7467 ribose ABC transporter. (313 aa)    
Predicted Functional Partners:
ADV14422.1
PFAM: inner-membrane translocator; KEGG: csa:Csal_0362 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
  0.987
ADV14423.1
ABC transporter related protein; KEGG: rle:pRL120202 putative ATP-binding component of ABC transporter; PFAM: ABC transporter related; SMART: AAA ATPase.
 
  0.983
ADV14408.1
PFAM: inner-membrane translocator; KEGG: mlo:mll7011 ribose ABC transporter, permease protein; Belongs to the binding-protein-dependent transport system permease family.
  0.961
ADV14407.1
KEGG: mlo:mll7012 ribose ABC transporter, ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase.
 
  0.922
ADV14405.1
PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: mlo:mll7014 ribose ABC transporter, periplasmic ribose-binding protein.
  
  
 
0.907
ADV14424.1
PFAM: periplasmic lipoprotein; KEGG: bmr:BMI_II855 hypothetical protein.
 
    0.907
ADV14418.1
PFAM: Xylose isomerase domain-containing protein TIM barrel; KEGG: sme:SMc01616 putative D-erythrulose-1-phosphate dehydrogenase protein.
 
    0.876
ADV14406.1
PFAM: periplasmic lipoprotein; KEGG: mlo:mll7013 hypothetical protein.
 
    0.774
ADV14420.1
PFAM: Carbohydrate kinase, FGGY-like; KEGG: mlo:mlr7268 xylulose kinase.
 
  
 0.768
ADV14417.1
TIGRFAM: triosephosphate isomerase; KEGG: mlo:mlr7275 triosephosphate isomerase; PFAM: triosephosphate isomerase.
 
     0.721
Your Current Organism:
Mesorhizobium ciceri biovar
NCBI taxonomy Id: 765698
Other names: M. ciceri biovar biserrulae WSM1271, Mesorhizobium ciceri biovar biserrulae WSM1271, Mesorhizobium ciceri biovar biserrulae str. WSM1271, Mesorhizobium ciceri biovar biserrulae strain WSM1271, Mesorhizobium ciceri bv. biserrulae WSM1271
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