STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDW05732.15-hydroxyisourate hydrolase. (119 aa)    
Predicted Functional Partners:
SDW05690.1
OHCU decarboxylase.
 
 0.999
SDX53475.1
Polysaccharide deacetylase.
 
 
  0.920
SDX83198.1
Sulfoxide reductase heme-binding subunit YedZ.
   
    0.881
SDX43894.1
Uncharacterized membrane protein.
 
  
 0.858
SDX77750.1
Xanthine dehydrogenase, molybdenum binding subunit apoprotein.
 
  
 0.858
SDW05606.1
Ureidoglycolate lyase.
 
    0.844
SDW23267.1
Guanine deaminase.
 
   
 0.822
SDX77728.1
Xanthine dehydrogenase small subunit.
 
     0.805
SDW29911.1
Flagellar motor switch protein FliM.
    
   0.801
SDW53145.1
Flagellar motor switch protein FliM.
    
   0.801
Your Current Organism:
Acidimangrovimonas indica
NCBI taxonomy Id: 765699
Other names: A. indica, Acidimangrovimonas indica (Jiang et al. 2014) Ren et al. 2019, CGMCC 1.10859, DSM 24802, Defluviimonas indica, Defluviimonas indica Jiang et al. 2014, JCM 17871, MCCC 1A01802, Rhodobacter sp. 20V17, strain 20V17
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