STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDW01988.1DNA-(apurinic or apyrimidinic site) lyase. (214 aa)    
Predicted Functional Partners:
SDW58962.1
Exodeoxyribonuclease III.
  
 0.958
SDX64194.1
Exodeoxyribonuclease-3.
  
 0.958
SDX03323.1
Endonuclease/Exonuclease/phosphatase family protein.
  
 0.939
SDW91959.1
DNA-(apurinic or apyrimidinic site) lyase.
   
  
 0.938
SDW19769.1
Na+-transporting NADH:ubiquinone oxidoreductase subunit D.
 
    
 0.882
SDW73694.1
Tryptophan synthase, alpha chain.
   
    0.859
SDW50509.1
Protein translocase subunit secB.
  
    0.843
SDW02018.1
Sugar or nucleoside kinase, ribokinase family.
       0.841
SDW02309.1
DNA polymerase I.
  
 
 0.784
SDW96603.1
DNA mismatch repair protein MutL.
 
 
 
 0.773
Your Current Organism:
Acidimangrovimonas indica
NCBI taxonomy Id: 765699
Other names: A. indica, Acidimangrovimonas indica (Jiang et al. 2014) Ren et al. 2019, CGMCC 1.10859, DSM 24802, Defluviimonas indica, Defluviimonas indica Jiang et al. 2014, JCM 17871, MCCC 1A01802, Rhodobacter sp. 20V17, strain 20V17
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.