STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDW25372.1Biotin carboxyl carrier protein /biotin carboxylase. (665 aa)    
Predicted Functional Partners:
SDW25548.1
propionyl-CoA carboxylase carboxyltransferase subunit.
 0.999
SDW86175.1
3-methylcrotonyl-CoA carboxylase beta subunit.
 
 0.999
SDX43083.1
acetyl-CoA carboxylase biotin carboxyl carrier protein.
 
 0.997
SDW82971.1
Biotin-requiring enzyme.
 
 0.996
SDW98111.1
acetyl-CoA carboxylase carboxyltransferase subunit alpha.
 0.994
SDX24203.1
acetyl-CoA carboxylase carboxyltransferase subunit alpha.
 
 0.992
SDW25288.1
methylmalonyl-CoA mutase.
 
 
 0.965
SDW93358.1
DNA-directed RNA polymerase subunit omega.
   
  0.958
SDW86277.1
hydroxymethylglutaryl-CoA lyase.
 
 
 0.936
SDW82875.1
Urea carboxylase.
 
 
  0.936
Your Current Organism:
Acidimangrovimonas indica
NCBI taxonomy Id: 765699
Other names: A. indica, Acidimangrovimonas indica (Jiang et al. 2014) Ren et al. 2019, CGMCC 1.10859, DSM 24802, Defluviimonas indica, Defluviimonas indica Jiang et al. 2014, JCM 17871, MCCC 1A01802, Rhodobacter sp. 20V17, strain 20V17
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