STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDW39783.1ATP-dependent Clp protease ATP-binding subunit ClpA. (773 aa)    
Predicted Functional Partners:
SDW47690.1
Molecular chaperone DnaK.
 
 
 0.996
SDW28297.1
ATP-dependent Clp protease proteolytic subunit ClpP.
  
 0.994
SDW94383.1
ATP-dependent Clp protease proteolytic subunit ClpP.
  
 0.994
SDW76484.1
Hypothetical protein.
   
 0.993
SDW31747.1
DnaJ domain-containing protein.
  
 0.992
SDW38542.1
DnaJ domain-containing protein.
  
 0.992
SDW47664.1
Molecular chaperone DnaJ.
  
 0.992
SDW08250.1
ATP-dependent Clp protease adaptor protein ClpS.
 
 
 0.990
SDW51214.1
Molecular chaperone GrpE.
  
 0.955
SDW09864.1
HSP20 family protein.
  
 
 0.928
Your Current Organism:
Acidimangrovimonas indica
NCBI taxonomy Id: 765699
Other names: A. indica, Acidimangrovimonas indica (Jiang et al. 2014) Ren et al. 2019, CGMCC 1.10859, DSM 24802, Defluviimonas indica, Defluviimonas indica Jiang et al. 2014, JCM 17871, MCCC 1A01802, Rhodobacter sp. 20V17, strain 20V17
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