Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDW07606.1 | SDW40340.1 | SAMN05444006_101212 | SAMN05444006_103129 | Enoyl-CoA hydratase. | 3-hydroxybutyryl-CoA dehydratase. | 0.897 |
SDW07606.1 | SDW82612.1 | SAMN05444006_101212 | SAMN05444006_10735 | Enoyl-CoA hydratase. | Phosphate acetyltransferase/phosphate butyryltransferase. | 0.647 |
SDW07606.1 | SDW93564.1 | SAMN05444006_101212 | SAMN05444006_10868 | Enoyl-CoA hydratase. | RNAse III. | 0.792 |
SDW07606.1 | SDX12457.1 | SAMN05444006_101212 | SAMN05444006_11079 | Enoyl-CoA hydratase. | 3-hydroxyacyl-CoA dehydrogenase. | 0.915 |
SDW23554.1 | SDW40340.1 | SAMN05444006_102145 | SAMN05444006_103129 | crotonyl-CoA carboxylase/reductase. | 3-hydroxybutyryl-CoA dehydratase. | 0.917 |
SDW23554.1 | SDW64346.1 | SAMN05444006_102145 | SAMN05444006_105195 | crotonyl-CoA carboxylase/reductase. | [Acyl-carrier-protein] S-malonyltransferase. | 0.401 |
SDW23554.1 | SDW82612.1 | SAMN05444006_102145 | SAMN05444006_10735 | crotonyl-CoA carboxylase/reductase. | Phosphate acetyltransferase/phosphate butyryltransferase. | 0.719 |
SDW23554.1 | SDX12457.1 | SAMN05444006_102145 | SAMN05444006_11079 | crotonyl-CoA carboxylase/reductase. | 3-hydroxyacyl-CoA dehydrogenase. | 0.589 |
SDW39297.1 | SDW40340.1 | SAMN05444006_103103 | SAMN05444006_103129 | Polyhydroxyalkanoate synthase. | 3-hydroxybutyryl-CoA dehydratase. | 0.938 |
SDW39297.1 | SDW82612.1 | SAMN05444006_103103 | SAMN05444006_10735 | Polyhydroxyalkanoate synthase. | Phosphate acetyltransferase/phosphate butyryltransferase. | 0.867 |
SDW39297.1 | SDX12457.1 | SAMN05444006_103103 | SAMN05444006_11079 | Polyhydroxyalkanoate synthase. | 3-hydroxyacyl-CoA dehydrogenase. | 0.883 |
SDW39297.1 | SDX88167.1 | SAMN05444006_103103 | SAMN05444006_13710 | Polyhydroxyalkanoate synthase. | Phosphate butyryltransferase. | 0.825 |
SDW40340.1 | SDW07606.1 | SAMN05444006_103129 | SAMN05444006_101212 | 3-hydroxybutyryl-CoA dehydratase. | Enoyl-CoA hydratase. | 0.897 |
SDW40340.1 | SDW23554.1 | SAMN05444006_103129 | SAMN05444006_102145 | 3-hydroxybutyryl-CoA dehydratase. | crotonyl-CoA carboxylase/reductase. | 0.917 |
SDW40340.1 | SDW39297.1 | SAMN05444006_103129 | SAMN05444006_103103 | 3-hydroxybutyryl-CoA dehydratase. | Polyhydroxyalkanoate synthase. | 0.938 |
SDW40340.1 | SDW60688.1 | SAMN05444006_103129 | SAMN05444006_10585 | 3-hydroxybutyryl-CoA dehydratase. | Nodulation protein E. | 0.825 |
SDW40340.1 | SDW64247.1 | SAMN05444006_103129 | SAMN05444006_105192 | 3-hydroxybutyryl-CoA dehydratase. | 3-oxoacyl-[acyl-carrier-protein] synthase II. | 0.825 |
SDW40340.1 | SDW64346.1 | SAMN05444006_103129 | SAMN05444006_105195 | 3-hydroxybutyryl-CoA dehydratase. | [Acyl-carrier-protein] S-malonyltransferase. | 0.841 |
SDW40340.1 | SDW82612.1 | SAMN05444006_103129 | SAMN05444006_10735 | 3-hydroxybutyryl-CoA dehydratase. | Phosphate acetyltransferase/phosphate butyryltransferase. | 0.890 |
SDW40340.1 | SDW93564.1 | SAMN05444006_103129 | SAMN05444006_10868 | 3-hydroxybutyryl-CoA dehydratase. | RNAse III. | 0.850 |
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