STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDW41158.1CTP synthase. (547 aa)    
Predicted Functional Partners:
SDX50126.1
LSU ribosomal protein L13P.
   
 
 0.992
SDX59515.1
GMP synthase (glutamine-hydrolysing).
  
 0.981
SDX80310.1
LSU ribosomal protein L3P.
   
 0.978
SDX54605.1
LSU ribosomal protein L10P.
   
 
 0.976
SDX79913.1
LSU ribosomal protein L6P.
   
 
 0.975
SDX79984.1
LSU ribosomal protein L5P.
   
 
 0.975
SDX80282.1
LSU ribosomal protein L4P.
   
 
 0.973
SDX80252.1
LSU ribosomal protein L23P.
   
 
 0.970
SDX80224.1
LSU ribosomal protein L2P.
   
 
 0.968
SDX79836.1
LSU ribosomal protein L30P.
   
   0.967
Your Current Organism:
Acidimangrovimonas indica
NCBI taxonomy Id: 765699
Other names: A. indica, Acidimangrovimonas indica (Jiang et al. 2014) Ren et al. 2019, CGMCC 1.10859, DSM 24802, Defluviimonas indica, Defluviimonas indica Jiang et al. 2014, JCM 17871, MCCC 1A01802, Rhodobacter sp. 20V17, strain 20V17
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.