STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDW38396.1Cobaltochelatase CobT subunit. (623 aa)    
Predicted Functional Partners:
SDW38507.1
Cobaltochelatase CobS subunit.
 
 
 0.985
SDX04911.1
Hydrogenobyrinic acid a,c-diamide synthase (glutamine-hydrolysing) /cobyrinate a,c-diamide synthase.
     
  0.923
SDX05226.1
Cobaltochelatase CobN subunit.
     
 0.900
SDX67287.1
ATP:cob(I)alamin adenosyltransferase.
    
  0.853
SDW38359.1
Xaa-Pro aminopeptidase.
 
     0.839
SDW38542.1
DnaJ domain-containing protein.
 
     0.764
SDW84443.1
Anthranilate phosphoribosyltransferase.
   
    0.700
SDX52362.1
GcrA cell cycle regulator.
  
     0.691
SDW38316.1
Uncharacterized conserved protein, DUF427 family.
       0.690
SDW52330.1
YggT family protein.
  
     0.681
Your Current Organism:
Acidimangrovimonas indica
NCBI taxonomy Id: 765699
Other names: A. indica, Acidimangrovimonas indica (Jiang et al. 2014) Ren et al. 2019, CGMCC 1.10859, DSM 24802, Defluviimonas indica, Defluviimonas indica Jiang et al. 2014, JCM 17871, MCCC 1A01802, Rhodobacter sp. 20V17, strain 20V17
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