STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDW62343.1Uncharacterized conserved protein, DUF2126 family. (1119 aa)    
Predicted Functional Partners:
SDW62312.1
Uncharacterized conserved protein, circularly permuted ATPgrasp superfamily.
  
 0.991
SDW62272.1
Transglutaminase-like enzyme, putative cysteine protease.
 
    
0.863
SDX13315.1
Excinuclease ABC subunit B.
    
  0.852
SDW01852.1
Excinuclease ABC subunit C.
    
  0.844
SDW87495.1
Excinuclease ABC subunit A.
    
  0.825
SDW83521.1
Uncharacterized conserved protein, circularly permuted ATPgrasp superfamily.
    0.769
SDW77456.1
Hydrogenase large subunit.
   
    0.742
SDW83564.1
Uncharacterized conserved protein, Alpha-E superfamily.
 
  
 0.721
SDX59515.1
GMP synthase (glutamine-hydrolysing).
  
 
  0.607
SDX18131.1
5'-nucleotidase /3'-nucleotidase.
    
  0.531
Your Current Organism:
Acidimangrovimonas indica
NCBI taxonomy Id: 765699
Other names: A. indica, Acidimangrovimonas indica (Jiang et al. 2014) Ren et al. 2019, CGMCC 1.10859, DSM 24802, Defluviimonas indica, Defluviimonas indica Jiang et al. 2014, JCM 17871, MCCC 1A01802, Rhodobacter sp. 20V17, strain 20V17
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.