Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDW23454.1 | SDW25288.1 | SAMN05444006_102143 | SAMN05444006_102184 | (R)-ethylmalonyl-CoA mutase. | methylmalonyl-CoA mutase. | 0.999 |
SDW23454.1 | SDW63027.1 | SAMN05444006_102143 | SAMN05444006_105155 | (R)-ethylmalonyl-CoA mutase. | Catechol 2,3-dioxygenase. | 0.741 |
SDW25288.1 | SDW23454.1 | SAMN05444006_102184 | SAMN05444006_102143 | methylmalonyl-CoA mutase. | (R)-ethylmalonyl-CoA mutase. | 0.999 |
SDW25288.1 | SDW63027.1 | SAMN05444006_102184 | SAMN05444006_105155 | methylmalonyl-CoA mutase. | Catechol 2,3-dioxygenase. | 0.773 |
SDW59347.1 | SDW63027.1 | SAMN05444006_10547 | SAMN05444006_105155 | Cytidine deaminase. | Catechol 2,3-dioxygenase. | 0.483 |
SDW59347.1 | SDX06839.1 | SAMN05444006_10547 | SAMN05444006_109150 | Cytidine deaminase. | Nitroreductase. | 0.684 |
SDW59347.1 | SDX85726.1 | SAMN05444006_10547 | SAMN05444006_13424 | Cytidine deaminase. | S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase. | 0.856 |
SDW63027.1 | SDW23454.1 | SAMN05444006_105155 | SAMN05444006_102143 | Catechol 2,3-dioxygenase. | (R)-ethylmalonyl-CoA mutase. | 0.741 |
SDW63027.1 | SDW25288.1 | SAMN05444006_105155 | SAMN05444006_102184 | Catechol 2,3-dioxygenase. | methylmalonyl-CoA mutase. | 0.773 |
SDW63027.1 | SDW59347.1 | SAMN05444006_105155 | SAMN05444006_10547 | Catechol 2,3-dioxygenase. | Cytidine deaminase. | 0.483 |
SDW63027.1 | SDW63057.1 | SAMN05444006_105155 | SAMN05444006_105156 | Catechol 2,3-dioxygenase. | Superoxide dismutase, Fe-Mn family. | 0.542 |
SDW63027.1 | SDW86465.1 | SAMN05444006_105155 | SAMN05444006_107145 | Catechol 2,3-dioxygenase. | NADH dehydrogenase subunit D. | 0.536 |
SDW63027.1 | SDW86862.1 | SAMN05444006_105155 | SAMN05444006_107157 | Catechol 2,3-dioxygenase. | NADH dehydrogenase subunit I. | 0.835 |
SDW63027.1 | SDW95915.1 | SAMN05444006_105155 | SAMN05444006_108133 | Catechol 2,3-dioxygenase. | Succinate dehydrogenase subunit C. | 0.724 |
SDW63027.1 | SDX06839.1 | SAMN05444006_105155 | SAMN05444006_109150 | Catechol 2,3-dioxygenase. | Nitroreductase. | 0.479 |
SDW63027.1 | SDX85726.1 | SAMN05444006_105155 | SAMN05444006_13424 | Catechol 2,3-dioxygenase. | S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase. | 0.479 |
SDW63027.1 | SDX91061.1 | SAMN05444006_105155 | SAMN05444006_1425 | Catechol 2,3-dioxygenase. | NADH-quinone oxidoreductase subunit D. | 0.536 |
SDW63057.1 | SDW63027.1 | SAMN05444006_105156 | SAMN05444006_105155 | Superoxide dismutase, Fe-Mn family. | Catechol 2,3-dioxygenase. | 0.542 |
SDW63057.1 | SDW95915.1 | SAMN05444006_105156 | SAMN05444006_108133 | Superoxide dismutase, Fe-Mn family. | Succinate dehydrogenase subunit C. | 0.504 |
SDW86465.1 | SDW63027.1 | SAMN05444006_107145 | SAMN05444006_105155 | NADH dehydrogenase subunit D. | Catechol 2,3-dioxygenase. | 0.536 |
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