STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDW63458.1Uncharacterized domain 1-containing protein. (139 aa)    
Predicted Functional Partners:
SDW06346.1
ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE.
  
 
  0.653
SDW94907.1
phenylacetate-CoA ligase.
 
 
 0.605
SDW63432.1
Uncharacterized conserved protein YkwD, contains CAP (CSP/antigen 5/PR1) domain.
       0.570
SDW58336.1
Phosphate:acyl-[acyl carrier protein] acyltransferase.
  
  
 0.546
SDW63494.1
Pyruvate dehydrogenase E1 component alpha subunit.
       0.524
SDW63523.1
Pyruvate dehydrogenase E1 component beta subunit.
       0.505
SDX89728.1
3-hydroxyacyl-CoA dehydrogenase.
 
 
 0.474
SDX17183.1
Short chain enoyl-CoA hydratase.
 
 
 0.464
SDW06214.1
ring-1,2-phenylacetyl-CoA epoxidase subunit PaaB.
  
 
 0.463
SDX23025.1
Short chain enoyl-CoA hydratase.
 
 
 0.447
Your Current Organism:
Acidimangrovimonas indica
NCBI taxonomy Id: 765699
Other names: A. indica, Acidimangrovimonas indica (Jiang et al. 2014) Ren et al. 2019, CGMCC 1.10859, DSM 24802, Defluviimonas indica, Defluviimonas indica Jiang et al. 2014, JCM 17871, MCCC 1A01802, Rhodobacter sp. 20V17, strain 20V17
Server load: low (30%) [HD]