STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDW87149.1Pantothenate kinase. (259 aa)    
Predicted Functional Partners:
SDW12795.1
Pantothenate synthetase.
  
 
 0.990
SDX30518.1
Phosphopantetheine adenylyltransferase.
 
  
 0.930
SDW87112.1
BirA family transcriptional regulator, biotin operon repressor / biotin-[acetyl-CoA-carboxylase] ligase.
  
    0.926
SDW02501.1
Phosphopantothenate-cysteine ligase.
 
 
 0.924
SDX16295.1
Thymidylate kinase.
   
   0.917
SDW87186.1
Ribonuclease J.
 
     0.861
SDW28854.1
ATP diphosphatase.
   
 
  0.856
SDW49385.1
Molecular chaperone Hsp33.
  
    0.767
SDW87075.1
NADH dehydrogenase subunit N.
       0.695
SDW86967.1
NADH dehydrogenase subunit K.
       0.684
Your Current Organism:
Acidimangrovimonas indica
NCBI taxonomy Id: 765699
Other names: A. indica, Acidimangrovimonas indica (Jiang et al. 2014) Ren et al. 2019, CGMCC 1.10859, DSM 24802, Defluviimonas indica, Defluviimonas indica Jiang et al. 2014, JCM 17871, MCCC 1A01802, Rhodobacter sp. 20V17, strain 20V17
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