STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDW96603.1DNA mismatch repair protein MutL. (625 aa)    
Predicted Functional Partners:
SDW92054.1
DNA mismatch repair protein MutS.
 
 0.999
SDX68583.1
ATP-dependent DNA helicase RecQ.
  
 0.999
SDW02309.1
DNA polymerase I.
  
 0.996
SDW69376.1
ATP-dependent DNA helicase, Rep family.
 
 0.985
SDW47064.1
DNA polymerase III, beta subunit.
  
 0.983
SDW52294.1
ATP-dependent DNA helicase RecQ.
  
 0.981
SDW20554.1
Recombination protein RecA.
   
 0.967
SDX29335.1
Transcription-repair coupling factor.
  
 
 0.956
SDW01852.1
Excinuclease ABC subunit C.
 
 
 0.954
SDW87495.1
Excinuclease ABC subunit A.
 
  
 0.946
Your Current Organism:
Acidimangrovimonas indica
NCBI taxonomy Id: 765699
Other names: A. indica, Acidimangrovimonas indica (Jiang et al. 2014) Ren et al. 2019, CGMCC 1.10859, DSM 24802, Defluviimonas indica, Defluviimonas indica Jiang et al. 2014, JCM 17871, MCCC 1A01802, Rhodobacter sp. 20V17, strain 20V17
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.