STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDW97545.1Core-2/I-Branching enzyme. (565 aa)    
Predicted Functional Partners:
SDW97510.1
LPS sulfotransferase NodH.
     0.982
SDW97581.1
Glycosyl transferase family 2.
 
   
 0.963
SDW97810.1
ABC-type polysaccharide/polyol phosphate export permease.
 
     0.848
SDW97617.1
Glycosyltransferase involved in cell wall bisynthesis.
 
     0.788
SDW20754.1
Hint domain-containing protein.
  
     0.774
SDX42576.1
Hypothetical protein.
  
     0.774
SDW01977.1
Hint domain-containing protein.
  
     0.773
SDX19416.1
Hypothetical protein.
  
     0.773
SDX40038.1
Hypothetical protein.
  
     0.773
SDX65843.1
Sulfotransferase family protein.
  
     0.773
Your Current Organism:
Acidimangrovimonas indica
NCBI taxonomy Id: 765699
Other names: A. indica, Acidimangrovimonas indica (Jiang et al. 2014) Ren et al. 2019, CGMCC 1.10859, DSM 24802, Defluviimonas indica, Defluviimonas indica Jiang et al. 2014, JCM 17871, MCCC 1A01802, Rhodobacter sp. 20V17, strain 20V17
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