STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDW97848.1Acetoin utilization deacetylase AcuC. (308 aa)    
Predicted Functional Partners:
SDX71388.1
Hypothetical protein.
    
 0.984
SDX50611.1
Hypothetical protein.
    
 0.981
SDX97279.1
Monoamine oxidase.
    
 0.981
SDW40011.1
ATP synthase F1 subcomplex beta subunit.
   
 0.958
SDW81682.1
Putative transposase.
    
  0.945
SDX87438.1
Peptidylprolyl isomerase.
   
  0.928
SDX87460.1
Peptidylprolyl isomerase.
   
  0.928
SDW31938.1
Ankyrin repeat-containing protein.
    
 0.898
SDW86433.1
Hypothetical protein.
    
 0.898
SDX67815.1
Hypothetical protein.
    
 0.898
Your Current Organism:
Acidimangrovimonas indica
NCBI taxonomy Id: 765699
Other names: A. indica, Acidimangrovimonas indica (Jiang et al. 2014) Ren et al. 2019, CGMCC 1.10859, DSM 24802, Defluviimonas indica, Defluviimonas indica Jiang et al. 2014, JCM 17871, MCCC 1A01802, Rhodobacter sp. 20V17, strain 20V17
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.