STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDW94383.1ATP-dependent Clp protease proteolytic subunit ClpP. (193 aa)    
Predicted Functional Partners:
SDW28262.1
ATP-dependent Clp protease ATP-binding subunit ClpX.
 0.999
SDW06075.1
ATP-dependent Clp protease ATP-binding subunit ClpB.
  
 0.995
SDW39783.1
ATP-dependent Clp protease ATP-binding subunit ClpA.
  
 0.994
SDW47690.1
Molecular chaperone DnaK.
   
 
 0.903
SDW51173.1
Heat-inducible transcription repressor HrcA.
   
  
 0.899
SDW50260.1
HslV component of HslUV peptidase. Threonine peptidase. MEROPS family T01B.
  
 0.888
SDW40045.1
ATP synthase F1 subcomplex epsilon subunit.
   
 
 0.877
SDW86862.1
NADH dehydrogenase subunit I.
  
 
 0.850
SDW51214.1
Molecular chaperone GrpE.
   
 
 0.848
SDW08250.1
ATP-dependent Clp protease adaptor protein ClpS.
   
 
 0.841
Your Current Organism:
Acidimangrovimonas indica
NCBI taxonomy Id: 765699
Other names: A. indica, Acidimangrovimonas indica (Jiang et al. 2014) Ren et al. 2019, CGMCC 1.10859, DSM 24802, Defluviimonas indica, Defluviimonas indica Jiang et al. 2014, JCM 17871, MCCC 1A01802, Rhodobacter sp. 20V17, strain 20V17
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