STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDX13216.1Prolipoprotein diacylglyceryl transferase. (299 aa)    
Predicted Functional Partners:
SDW35601.1
Protein translocase subunit yidC.
 
  
 0.937
SDW73694.1
Tryptophan synthase, alpha chain.
  
    0.936
SDX01862.1
Tryptophan synthase, beta chain.
  
    0.931
SDW49662.1
Glycerol-3-phosphate dehydrogenase (NAD(P)+).
  
    0.890
SDX13181.1
SAM-dependent methyltransferase, MidA family.
 
     0.883
SDW70786.1
Alanine racemase.
  
    0.882
SDX13152.1
Conserved hypothetical protein.
 
     0.882
SDX44231.1
4-hydroxybenzoate polyprenyltransferase.
  
    0.879
SDW91652.1
Hpr(Ser) kinase/phosphatase.
  
  
 0.873
SDX39415.1
Triosephosphate isomerase.
 
  
 0.846
Your Current Organism:
Acidimangrovimonas indica
NCBI taxonomy Id: 765699
Other names: A. indica, Acidimangrovimonas indica (Jiang et al. 2014) Ren et al. 2019, CGMCC 1.10859, DSM 24802, Defluviimonas indica, Defluviimonas indica Jiang et al. 2014, JCM 17871, MCCC 1A01802, Rhodobacter sp. 20V17, strain 20V17
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