STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDX12820.1Malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+). (759 aa)    
Predicted Functional Partners:
SDW63523.1
Pyruvate dehydrogenase E1 component beta subunit.
  
 
 0.995
SDW38850.1
Malate synthase.
 
 
 0.989
SDW21180.1
Fumarase, class II.
  
 
 0.983
SDX23746.1
Pyruvate kinase.
  
 0.969
SDW82661.1
Acetate kinase.
  
 
 0.965
SDX88190.1
Acetate kinase.
  
 
 0.965
SDW05013.1
Malate dehydrogenase (NAD).
  
 0.964
SDW84134.1
Citrate synthase.
  
 0.962
SDW05086.1
succinyl-CoA synthetase (ADP-forming) beta subunit.
  
 
 0.958
SDW69415.1
Pyruvate carboxylase.
   
 0.942
Your Current Organism:
Acidimangrovimonas indica
NCBI taxonomy Id: 765699
Other names: A. indica, Acidimangrovimonas indica (Jiang et al. 2014) Ren et al. 2019, CGMCC 1.10859, DSM 24802, Defluviimonas indica, Defluviimonas indica Jiang et al. 2014, JCM 17871, MCCC 1A01802, Rhodobacter sp. 20V17, strain 20V17
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.