STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDX17958.1Cell division protein FtsI (penicillin-binding protein 3). (599 aa)    
Predicted Functional Partners:
SDX17794.1
Cell division protein FtsW.
 0.998
SDX82840.1
Cell elongation-specific peptidoglycan biosynthesis regulator RodA.
 0.997
SDX17930.1
UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase.
  
 0.996
SDW37971.1
Cell division protein FtsQ.
  
 0.995
SDW37999.1
Cell division protein FtsA.
 
 0.986
SDX17878.1
Phospho-N-acetylmuramoyl-pentapeptide- transferase.
  
 0.982
SDX18011.1
16S rRNA (cytosine1402-N4)-methyltransferase.
  
 0.981
SDX77521.1
Penicillin-binding protein, 1A family.
 
 
0.977
SDX17902.1
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase.
  
 0.971
SDX17824.1
UDP-N-acetylmuramoylalanine--D-glutamate ligase.
  
 0.966
Your Current Organism:
Acidimangrovimonas indica
NCBI taxonomy Id: 765699
Other names: A. indica, Acidimangrovimonas indica (Jiang et al. 2014) Ren et al. 2019, CGMCC 1.10859, DSM 24802, Defluviimonas indica, Defluviimonas indica Jiang et al. 2014, JCM 17871, MCCC 1A01802, Rhodobacter sp. 20V17, strain 20V17
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