STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDX16448.1Hypothetical protein. (386 aa)    
Predicted Functional Partners:
SDX16361.1
TatD DNase family protein.
       0.576
SDX16399.1
Phosphoribosyl 1,2-cyclic phosphate phosphodiesterase.
       0.576
SDX16423.1
Hypothetical protein.
       0.576
SDX16295.1
Thymidylate kinase.
       0.572
SDX16329.1
DNA polymerase III, delta prime subunit.
       0.572
SDX16266.1
D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5/6).
       0.522
SDW43331.1
aromatic-L-amino-acid decarboxylase.
  
  
  0.507
SDX16240.1
Cell division protein DedD (protein involved in septation).
       0.484
SDX85296.1
Uncharacterized conserved protein YdeI, YjbR/CyaY-like superfamily, DUF1801 family.
  
     0.452
SDW72973.1
Transcriptional regulator, TetR family.
  
     0.426
Your Current Organism:
Acidimangrovimonas indica
NCBI taxonomy Id: 765699
Other names: A. indica, Acidimangrovimonas indica (Jiang et al. 2014) Ren et al. 2019, CGMCC 1.10859, DSM 24802, Defluviimonas indica, Defluviimonas indica Jiang et al. 2014, JCM 17871, MCCC 1A01802, Rhodobacter sp. 20V17, strain 20V17
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.