STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDX18915.1Polysaccharide export outer membrane protein. (380 aa)    
Predicted Functional Partners:
SDX97482.1
Tyrosine-protein kinase Etk/Wzc.
 
 0.997
SDX02852.1
Capsular exopolysaccharide family.
  
 0.996
SDX18946.1
Capsular polysaccharide export protein.
 
  
 0.993
SDX50206.1
Capsular polysaccharide transport system ATP-binding protein.
 
  
 0.973
SDX50237.1
Capsular polysaccharide transport system permease protein.
 
  
 0.972
SDW98470.1
Capsular polysaccharide transport system permease protein.
 
  
 0.963
SDW97810.1
ABC-type polysaccharide/polyol phosphate export permease.
 
  
 0.952
SDW98435.1
Capsular polysaccharide transport system permease protein.
 
  
 0.939
SDW11126.1
Polysaccharide chain length determinant protein, PEP-CTERM locus subfamily.
  
 0.918
SDX18887.1
Capsular polysaccharide export protein.
 
   
 0.910
Your Current Organism:
Acidimangrovimonas indica
NCBI taxonomy Id: 765699
Other names: A. indica, Acidimangrovimonas indica (Jiang et al. 2014) Ren et al. 2019, CGMCC 1.10859, DSM 24802, Defluviimonas indica, Defluviimonas indica Jiang et al. 2014, JCM 17871, MCCC 1A01802, Rhodobacter sp. 20V17, strain 20V17
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.