STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDX24802.1Adenylate kinase. (228 aa)    
Predicted Functional Partners:
SDX79681.1
SSU ribosomal protein S11P.
 
 0.961
SDX54698.1
DNA-directed RNA polymerase subunit beta'.
  
 
 0.960
SDX79758.1
Protein translocase subunit secY/sec61 alpha.
 
  
 0.960
SDW60910.1
Hypoxanthine phosphoribosyltransferase.
 
 
 0.959
SDX80026.1
LSU ribosomal protein L14P.
 
 
 0.954
SDX80310.1
LSU ribosomal protein L3P.
 
 
 0.951
SDX79783.1
LSU ribosomal protein L15P.
  
 0.950
SDX79984.1
LSU ribosomal protein L5P.
 
  
 0.950
SDW39971.1
F-type H+-transporting ATPase subunit gamma.
   
 
 0.949
SDX79703.1
SSU ribosomal protein S13P.
  
 0.948
Your Current Organism:
Acidimangrovimonas indica
NCBI taxonomy Id: 765699
Other names: A. indica, Acidimangrovimonas indica (Jiang et al. 2014) Ren et al. 2019, CGMCC 1.10859, DSM 24802, Defluviimonas indica, Defluviimonas indica Jiang et al. 2014, JCM 17871, MCCC 1A01802, Rhodobacter sp. 20V17, strain 20V17
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