STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDX33974.1Acyl dehydratase. (288 aa)    
Predicted Functional Partners:
SDX34038.1
NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family.
  0.996
SDX33870.1
Hypothetical protein.
 
   0.982
SDX60421.1
NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family.
 
  0.979
SDX34004.1
Short chain enoyl-CoA hydratase /Enoyl-CoA hydratase.
  
  0.972
SDX33905.1
Acetyl-CoA acetyltransferase.
 
  0.970
SDW04343.1
3-oxoacyl-[acyl-carrier-protein] reductase.
 
 
  0.960
SDW64313.1
3-oxoacyl-[acyl-carrier-protein] reductase.
 
 
  0.960
SDX66581.1
3-hydroxybutyrate dehydrogenase.
 
 
  0.960
SDX89046.1
3-oxoacyl-[acyl-carrier protein] reductase.
 
 
  0.960
SDX49832.1
3-hydroxybutyrate dehydrogenase.
 
 
  0.951
Your Current Organism:
Acidimangrovimonas indica
NCBI taxonomy Id: 765699
Other names: A. indica, Acidimangrovimonas indica (Jiang et al. 2014) Ren et al. 2019, CGMCC 1.10859, DSM 24802, Defluviimonas indica, Defluviimonas indica Jiang et al. 2014, JCM 17871, MCCC 1A01802, Rhodobacter sp. 20V17, strain 20V17
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