STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDX56055.1RelE toxin of RelE / RelB toxin-antitoxin system. (112 aa)    
Predicted Functional Partners:
SDX56018.1
Putative transcriptional regulator.
 
 0.999
SDX81937.1
DNA-damage-inducible protein J.
  
 0.990
SDX34383.1
Transcriptional regulator, XRE family.
    
 0.723
SDX81289.1
Antitoxin MazE.
 
  
 0.684
SDX20107.1
Serine/threonine-protein kinase HipA.
  
  
 0.627
SDX72318.1
Hypothetical protein.
 
   
 0.598
SDX34411.1
Serine/threonine-protein kinase HipA.
     
 0.571
SDX57776.1
Serine/threonine-protein kinase HipA.
     
 0.571
SDX56087.1
Ribbon-helix-helix protein, copG family.
       0.426
Your Current Organism:
Acidimangrovimonas indica
NCBI taxonomy Id: 765699
Other names: A. indica, Acidimangrovimonas indica (Jiang et al. 2014) Ren et al. 2019, CGMCC 1.10859, DSM 24802, Defluviimonas indica, Defluviimonas indica Jiang et al. 2014, JCM 17871, MCCC 1A01802, Rhodobacter sp. 20V17, strain 20V17
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.