STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDX59278.1Branched-chain amino acid transport system ATP-binding protein. (49 aa)    
Predicted Functional Partners:
SDX70037.1
Amino acid/amide ABC transporter membrane protein 2, HAAT family /amino acid/amide ABC transporter ATP-binding protein 1, HAAT family.
  
 
 0.964
SDX78170.1
Peptide/nickel transport system permease protein.
   
 
  0.854
SDX59241.1
Branched-chain amino acid transport system ATP-binding protein.
 
     0.827
SDX63070.1
Lipopolysaccharide export system permease protein.
   
 
  0.738
SDX33649.1
Amino acid/amide ABC transporter membrane protein 1, HAAT family.
  
 
  0.721
SDX33693.1
Amino acid/amide ABC transporter membrane protein 2, HAAT family.
  
 
  0.701
SDX63029.1
Lipopolysaccharide export system permease protein.
   
 
  0.681
SDW28784.1
Spermidine/putrescine transport system ATP-binding protein.
   
 
  0.679
SDW83085.1
Putative spermidine/putrescine transport system ATP-binding protein.
   
 
  0.679
SDX25532.1
Putative spermidine/putrescine transport system ATP-binding protein.
   
 
  0.679
Your Current Organism:
Acidimangrovimonas indica
NCBI taxonomy Id: 765699
Other names: A. indica, Acidimangrovimonas indica (Jiang et al. 2014) Ren et al. 2019, CGMCC 1.10859, DSM 24802, Defluviimonas indica, Defluviimonas indica Jiang et al. 2014, JCM 17871, MCCC 1A01802, Rhodobacter sp. 20V17, strain 20V17
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