STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDX65728.1Polyribonucleotide nucleotidyltransferase. (714 aa)    
Predicted Functional Partners:
SDW87224.1
Superfamily II DNA and RNA helicase.
 
 0.997
SDX47910.1
ATP-dependent RNA helicase RhlE.
 
 0.997
SDX23317.1
ATP-dependent RNA helicase DeaD.
 
 0.996
SDX54865.1
Translation elongation factor 2 (EF-2/EF-G).
  
 0.993
SDW21700.1
RNAse E.
  
 0.987
SDX80224.1
LSU ribosomal protein L2P.
   
  0.987
SDX54573.1
LSU ribosomal protein L1P.
   
 
 0.985
SDX46533.1
Enolase.
   
 0.982
SDX67121.1
Ribonuclease, Rne/Rng family.
  
 0.981
SDX79984.1
LSU ribosomal protein L5P.
   
 
  0.980
Your Current Organism:
Acidimangrovimonas indica
NCBI taxonomy Id: 765699
Other names: A. indica, Acidimangrovimonas indica (Jiang et al. 2014) Ren et al. 2019, CGMCC 1.10859, DSM 24802, Defluviimonas indica, Defluviimonas indica Jiang et al. 2014, JCM 17871, MCCC 1A01802, Rhodobacter sp. 20V17, strain 20V17
Server load: low (18%) [HD]