STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDX66712.1Hypothetical protein. (172 aa)    
Predicted Functional Partners:
SDX66742.1
Dihydroxy-acid dehydratase.
 
  
 0.886
SDX66681.1
2-keto-3-deoxygluconate kinase.
 
     0.836
SDX36025.1
Gluconolactonase.
 
   
 0.723
SDX70699.1
Altronate hydrolase/galactarate dehydratase.
 
   
 0.648
SDX66868.1
Nucleoside-diphosphate-sugar epimerase.
 
     0.612
SDX70674.1
2-keto-3-deoxy-L-fuconate dehydrogenase.
  
     0.543
SDW87259.1
Dihydroxyacid dehydratase.
    
 0.526
SDW61268.1
6-phosphogluconate dehydratase.
    
 0.513
SDX33478.1
L-alanine-DL-glutamate epimerase.
 
  
 0.506
SDX66771.1
NADP-dependent 3-hydroxy acid dehydrogenase YdfG.
 
     0.492
Your Current Organism:
Acidimangrovimonas indica
NCBI taxonomy Id: 765699
Other names: A. indica, Acidimangrovimonas indica (Jiang et al. 2014) Ren et al. 2019, CGMCC 1.10859, DSM 24802, Defluviimonas indica, Defluviimonas indica Jiang et al. 2014, JCM 17871, MCCC 1A01802, Rhodobacter sp. 20V17, strain 20V17
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