STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDX76267.1Indolepyruvate ferredoxin oxidoreductase. (1140 aa)    
Predicted Functional Partners:
SDX86328.1
Indolepyruvate ferredoxin oxidoreductase.
 
0.997
SDW95832.1
Succinate dehydrogenase subunit A.
  
 0.991
SDX35527.1
L-aspartate oxidase.
  
 0.991
SDX35624.1
Tricarballylate dehydrogenase.
  
 0.991
SDX28764.1
4Fe-4S binding domain-containing protein.
  
 
 0.965
SDX43015.1
Dihydropyrimidine dehydrogenase (NAD+) subunit PreA.
  
 
 0.948
SDW86862.1
NADH dehydrogenase subunit I.
  
 0.931
SDX12820.1
Malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+).
    
 0.930
SDW47984.1
Glutamate synthase (NADPH) large subunit.
    
 0.923
SDW23454.1
(R)-ethylmalonyl-CoA mutase.
    
 0.921
Your Current Organism:
Acidimangrovimonas indica
NCBI taxonomy Id: 765699
Other names: A. indica, Acidimangrovimonas indica (Jiang et al. 2014) Ren et al. 2019, CGMCC 1.10859, DSM 24802, Defluviimonas indica, Defluviimonas indica Jiang et al. 2014, JCM 17871, MCCC 1A01802, Rhodobacter sp. 20V17, strain 20V17
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