STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDX90331.1Chaperonin GroEL. (282 aa)    
Predicted Functional Partners:
SDW40499.1
Chaperonin GroES.
 0.999
SDW47690.1
Molecular chaperone DnaK.
 
 0.999
SDX58080.1
Chaperonin GroES.
 0.999
SDW51214.1
Molecular chaperone GrpE.
 
 0.989
SDW47664.1
Molecular chaperone DnaJ.
 
 0.988
SDW31747.1
DnaJ domain-containing protein.
 
 0.980
SDX58110.1
Chaperonin GroEL.
 
     0.976
SDW38542.1
DnaJ domain-containing protein.
  
 0.975
SDX52817.1
ATP-dependent helicase HrpB.
   
 0.951
SDX54865.1
Translation elongation factor 2 (EF-2/EF-G).
  
 0.950
Your Current Organism:
Acidimangrovimonas indica
NCBI taxonomy Id: 765699
Other names: A. indica, Acidimangrovimonas indica (Jiang et al. 2014) Ren et al. 2019, CGMCC 1.10859, DSM 24802, Defluviimonas indica, Defluviimonas indica Jiang et al. 2014, JCM 17871, MCCC 1A01802, Rhodobacter sp. 20V17, strain 20V17
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.