STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yicI_1Alpha-xylosidase. (806 aa)    
Predicted Functional Partners:
yicI_2
Alpha-xylosidase.
 
    
0.777
SCH15229.1
Coenzyme F420 hydrogenase%2C subunit gamma.
       0.773
tvaI
Neopullulanase 1 precursor.
 
 
 0.733
gmuF
Probable mannose-6-phosphate isomerase gmuF.
  
 
 0.708
rafA
Alpha-galactosidase.
    
 0.692
fbaA_2
Probable fructose-bisphosphate aldolase.
   
   0.689
SCH15207.1
Maltose-binding periplasmic proteins/domains.
 
    0.688
sacA
Sucrose-6-phosphate hydrolase.
     
 0.686
levB
Levanbiose-producing levanase.
     
 0.682
SCH67677.1
Cyclomaltodextrinase.
  
 
 0.671
Your Current Organism:
uncultured Blautia sp.
NCBI taxonomy Id: 765821
Other names: u. Blautia sp.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.