Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SCH46721.1 | cdr_1 | SAMEA3545244_01572 | SAMEA3545244_01575 | Sporulation sigma factor SigG. | Coenzyme A disulfide reductase. | 0.502 |
SCH46721.1 | pspE_2 | SAMEA3545244_01572 | SAMEA3545244_01574 | Sporulation sigma factor SigG. | Thiosulfate sulfurtransferase PspE precursor. | 0.502 |
SCH46721.1 | trxA_2 | SAMEA3545244_01572 | SAMEA3545244_01573 | Sporulation sigma factor SigG. | Thioredoxin-M. | 0.518 |
cdr_1 | SCH46721.1 | SAMEA3545244_01575 | SAMEA3545244_01572 | Coenzyme A disulfide reductase. | Sporulation sigma factor SigG. | 0.502 |
cdr_1 | pspE_2 | SAMEA3545244_01575 | SAMEA3545244_01574 | Coenzyme A disulfide reductase. | Thiosulfate sulfurtransferase PspE precursor. | 0.820 |
cdr_1 | trxA_2 | SAMEA3545244_01575 | SAMEA3545244_01573 | Coenzyme A disulfide reductase. | Thioredoxin-M. | 0.799 |
pspE_2 | SCH46721.1 | SAMEA3545244_01574 | SAMEA3545244_01572 | Thiosulfate sulfurtransferase PspE precursor. | Sporulation sigma factor SigG. | 0.502 |
pspE_2 | cdr_1 | SAMEA3545244_01574 | SAMEA3545244_01575 | Thiosulfate sulfurtransferase PspE precursor. | Coenzyme A disulfide reductase. | 0.820 |
pspE_2 | trxA_2 | SAMEA3545244_01574 | SAMEA3545244_01573 | Thiosulfate sulfurtransferase PspE precursor. | Thioredoxin-M. | 0.755 |
trxA_2 | SCH46721.1 | SAMEA3545244_01573 | SAMEA3545244_01572 | Thioredoxin-M. | Sporulation sigma factor SigG. | 0.518 |
trxA_2 | cdr_1 | SAMEA3545244_01573 | SAMEA3545244_01575 | Thioredoxin-M. | Coenzyme A disulfide reductase. | 0.799 |
trxA_2 | pspE_2 | SAMEA3545244_01573 | SAMEA3545244_01574 | Thioredoxin-M. | Thiosulfate sulfurtransferase PspE precursor. | 0.755 |