A0A178DHS8 protein (Pyrenochaeta sp. DS3sAY3a)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

A0A178DHS8

6-phosphogluconate dehydrogenase C-terminal domain-like protein. (304 aa)

Predicted Functional Partners:

A0A178DS02

0.871

A0A178EK66

0.846

A0A178EIA1

0.731

A0A178DNT7

0.709

A0A178EFD5

0.701

A0A178DPL9

0.697

A0A178DND6

0.682

A0A178E226

0.682

A0A178EL53

0.670

A0A178EEC6

0.639

Your Current Organism:

Pyrenochaeta sp. DS3sAY3a

NCBI taxonomy Id: 765867
Other names: P. sp. DS3sAY3a

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A178DHS8	A0A178DND6	6-phosphogluconate dehydrogenase C-terminal domain-like protein.	Acetyl-CoA synthetase-like protein.	0.682
A0A178DHS8	A0A178DNT7	6-phosphogluconate dehydrogenase C-terminal domain-like protein.	3-hydroxyisobutyrate dehydrogenase-like protein.	0.709
A0A178DHS8	A0A178DPL9	6-phosphogluconate dehydrogenase C-terminal domain-like protein.	Uncharacterized protein.	0.697
A0A178DHS8	A0A178DS02	6-phosphogluconate dehydrogenase C-terminal domain-like protein.	3-hydroxyisobutyryl-CoA hydrolase, mitochondrial; Hydrolyzes 3-hydroxyisobutyryl-CoA (HIBYL-CoA), a saline catabolite; Belongs to the enoyl-CoA hydratase/isomerase family.	0.871
A0A178DHS8	A0A178E226	6-phosphogluconate dehydrogenase C-terminal domain-like protein.	Acetyl-coenzyme A synthetase.	0.682
A0A178DHS8	A0A178EEC6	6-phosphogluconate dehydrogenase C-terminal domain-like protein.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.639
A0A178DHS8	A0A178EFD5	6-phosphogluconate dehydrogenase C-terminal domain-like protein.	3-hydroxyisobutyrate dehydrogenase; Belongs to the HIBADH-related family.	0.701
A0A178DHS8	A0A178EIA1	6-phosphogluconate dehydrogenase C-terminal domain-like protein.	Methylmalonate-semialdehyde dehydrogenase.	0.731
A0A178DHS8	A0A178EK66	6-phosphogluconate dehydrogenase C-terminal domain-like protein.	Methylmalonate-semialdehyde dehydrogenase.	0.846
A0A178DHS8	A0A178EL53	6-phosphogluconate dehydrogenase C-terminal domain-like protein.	ALDH-like protein.	0.670
A0A178DND6	A0A178DHS8	Acetyl-CoA synthetase-like protein.	6-phosphogluconate dehydrogenase C-terminal domain-like protein.	0.682
A0A178DND6	A0A178DNT7	Acetyl-CoA synthetase-like protein.	3-hydroxyisobutyrate dehydrogenase-like protein.	0.766
A0A178DND6	A0A178DPL9	Acetyl-CoA synthetase-like protein.	Uncharacterized protein.	0.766
A0A178DND6	A0A178E226	Acetyl-CoA synthetase-like protein.	Acetyl-coenzyme A synthetase.	0.788
A0A178DND6	A0A178EFD5	Acetyl-CoA synthetase-like protein.	3-hydroxyisobutyrate dehydrogenase; Belongs to the HIBADH-related family.	0.766
A0A178DND6	A0A178EIA1	Acetyl-CoA synthetase-like protein.	Methylmalonate-semialdehyde dehydrogenase.	0.725
A0A178DND6	A0A178EK66	Acetyl-CoA synthetase-like protein.	Methylmalonate-semialdehyde dehydrogenase.	0.797
A0A178DND6	A0A178EL53	Acetyl-CoA synthetase-like protein.	ALDH-like protein.	0.838
A0A178DNT7	A0A178DHS8	3-hydroxyisobutyrate dehydrogenase-like protein.	6-phosphogluconate dehydrogenase C-terminal domain-like protein.	0.709
A0A178DNT7	A0A178DND6	3-hydroxyisobutyrate dehydrogenase-like protein.	Acetyl-CoA synthetase-like protein.	0.766