STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A178DLW4FAA_hydrolase domain-containing protein. (275 aa)    
Predicted Functional Partners:
A0A178DW32
3-isopropylmalate dehydratase; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate.
  
 
  0.579
A0A178E3F2
Malate synthase; Belongs to the malate synthase family.
    
 0.476
A0A178DFY8
Homogentisate 1,2-dioxygenase-like protein.
  
 
 0.447
A0A178DKL0
Homogentisate 1,2-dioxygenase.
  
 
 0.447
A0A178DLJ3
Uncharacterized protein.
  
 
 0.447
A0A178DTI2
Homogentisate 1,2-dioxygenase.
  
 
 0.447
A0A178E3W4
Homogentisate 1,2-dioxygenase.
  
 
 0.447
A0A178EBJ2
Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial; Iron-sulfur protein (IP) subunit of succinate dehydrogenase (SDH) that is involved in complex II of the mitochondrial electron transport chain and is responsible for transferring electrons from succinate to ubiquinone (coenzyme Q).
  
 
  0.436
A0A178DZD9
Purine catabolism protein pucG.
   
 
  0.416
A0A178DHD3
Uncharacterized protein.
   
  0.409
Your Current Organism:
Pyrenochaeta sp. DS3sAY3a
NCBI taxonomy Id: 765867
Other names: P. sp. DS3sAY3a
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